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Combining parallel detection of proton echo planar spectroscopic imaging (PEPSI) measurements with a data-consistency constraint improves SNR

  • Shang Yueh Tsai
  • , Yi Cheng Hsu
  • , Ying Hua Chu
  • , Wen Jui Kuo
  • , Fa Hsuan Lin*
  • *Corresponding author for this work
  • National Chengchi University
  • National Taiwan University
  • National Yang Ming Chiao Tung University
  • Aalto University

Research output: Contribution to journalJournal Article peer-review

Abstract

One major challenge of MRSI is the poor signal-to-noise ratio (SNR), which can be improved by using a surface coil array. Here we propose to exploit the spatial sensitivity of different channels of a coil array to enforce the k-space data consistency (DC) in order to suppress noise and consequently to improve MRSI SNR. MRSI data were collected using a proton echo planar spectroscopic imaging (PEPSI) sequence at 3T using a 32-channel coil array and were averaged with one, two and eight measurements (avg-1, avg-2 and avg-8). The DC constraint was applied using a regularization parameter λ of 1, 2, 3, 5 or 10. Metabolite concentrations were quantified using LCModel. Our results show that the suppression of noise by applying the DC constraint to PEPSI reconstruction yields up to 32% and 27% SNR gain for avg-1 and avg-2 data with λ=5, respectively. According to the reported Cramer-Rao lower bounds, the improvement in metabolic fitting was significant (p<0.01) when the DC constraint was applied with λ ≥ 2. Using the DC constraint with λ=3 or 5 can minimize both root-mean-square errors and spatial variation for all subjects using the avg-8 data set as reference values. Our results suggest that MRSI reconstructed with a DC constraint can save around 70% of scanning time to obtain images and spectra with similar SNRs using λ=5.

Original languageEnglish
Pages (from-to)1678-1687
Number of pages10
JournalNMR in Biomedicine
Volume28
Issue number12
DOIs
StatePublished - 01 12 2015
Externally publishedYes

Bibliographical note

Publisher Copyright:
© 2015 John Wiley & Sons, Ltd.

Keywords

  • Data consistency
  • Proton echo planar spectroscopy imaging
  • Regularization
  • SNR

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