On the calculation of system entropy in nonlinear stochastic biological networks

Bor Sen Chen*, Shang Wen Wong, Cheng Wei Li

*Corresponding author for this work

Research output: Contribution to journalJournal Article peer-review

13 Scopus citations

Abstract

Biological networks are open systems that can utilize nutrients and energy from their environment for use in their metabolic processes, and produce metabolic products. System entropy is defined as the difference between input and output signal entropy, i.e., the net signal entropy of the biological system. System entropy is an important indicator for living or non-living biological systems, as biological systems can maintain or decrease their system entropy. In this study, system entropy is determined for the first time for stochastic biological networks, and a computation method is proposed to measure the system entropy of nonlinear stochastic biological networks that are subject to intrinsic random fluctuations and environmental disturbances. We find that intrinsic random fluctuations could increase the system entropy, and that the system entropy is inversely proportional to the robustness and stability of the biological networks. It is also determined that adding feedback loops to shift all eigenvalues to the farther left-hand plane of the complex s-domain could decrease the system entropy of a biological network.

Original languageEnglish
Pages (from-to)6801-6833
Number of pages33
JournalEntropy
Volume17
Issue number10
DOIs
StatePublished - 2015
Externally publishedYes

Bibliographical note

Publisher Copyright:
© 2015 by the authors.

Keywords

  • Biological network
  • Hamilton-Jacobi inequality (HJI)
  • Linear matrix inequality (LMI)
  • Nonlinear stochastic system
  • Open system
  • System entropy
  • Thermodynamics

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