Abstract
In this paper, we propose a bio-molecular algorithm with O(n2) biological operations, O(2n-1) DNA strands, O(n) tubes and the longest DNA strand, O(n), for inferring the value of a bit from the only output satisfying any given condition in an unsorted database with 2n items of n bits. We show that the value of each bit of the outcome is determined by executing our bio-molecular algorithm n times. Then, we show how to view a bio-molecular solution space with 2n-1 DNA strands as an eigenvector and how to find the corresponding unitary operator and eigenvalues for inferring the value of a bit in the output. We also show that using an extension of the quantum phase estimation and quantum counting algorithms computes its unitary operator and eigenvalues frombio-molecularsolution spacewith 2n-1 DNA strands.Next,we demonstrate that the value of each bit of the output solution can be determined by executing the proposed extended quantum algorithms n times. To verify our theorem, we find the maximum-sized clique to a graph with two vertices and one edge and the solution b that satisfies b2 1 (mod 15) and 1 b (15/2) using IBM Quantum s backend.
| Original language | English |
|---|---|
| Pages (from-to) | 286-293 |
| Number of pages | 8 |
| Journal | IEEE Transactions on Nanobioscience |
| Volume | 21 |
| Issue number | 2 |
| DOIs | |
| State | Published - 01 04 2022 |
| Externally published | Yes |
Bibliographical note
Publisher Copyright:© 2002-2011 IEEE.
Keywords
- Data structures and algorithms
- NP-complete problems
- molecular algorithms
- quantum algorithms
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