Raman spectroscopy analysis for optical diagnosis of oral cancer detection

Ming Jer Jeng, Mukta Sharma, Lokesh Sharma, Ting Yu Chao, Shiang Fu Huang*, Liann Be Chang, Shih Lin Wu, Lee Chow

*Corresponding author for this work

Research output: Contribution to journalJournal Article peer-review

83 Scopus citations

Abstract

Raman spectroscopy (RS) is widely used as a non-invasive technique in screening for the diagnosis of oral cancer. The potential of this optical technique for several biomedical applications has been proved. This work studies the efficacy of RS in detecting oral cancer using sub-site-wise differentiation. A total of 80 samples (44 tumor and 36 normal) were cryopreserved from three different sub-sites: The tongue, the buccal mucosa, and the gingiva of the oral mucosa during surgery. Linear discriminant analysis (LDA) and quadratic discriminant analysis (QDA) were used with principal component analysis (PCA) to classify the samples and the classifications were validated by leave-one-out-cross-validation (LOOCV) and k-fold cross-validation methods. The normal and tumor tissues were differentiated under the PCA-LDA model with an accuracy of 81.25% (sensitivity: 77.27%, specificity: 86.11%). The PCA-QDA classifier model differentiated these tissues with an accuracy of 87.5% (sensitivity: 90.90%, specificity: 83.33%). The PCA-QDA classifier model outperformed the PCA-LDA-based classifier. The model studies revealed that protein, amino acid, and beta-carotene variations are the main biomolecular difference markers for detecting oral cancer.

Original languageEnglish
Article number1313
JournalJournal of Clinical Medicine
Volume8
Issue number9
DOIs
StatePublished - 09 2019

Bibliographical note

Publisher Copyright:
© 2019 by the authors. Licensee MDPI, Basel, Switzerland.

Keywords

  • Cryopreserved tissue
  • Oral cancer
  • PCA-LDA
  • PCA-QDA
  • Raman spectroscopy

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