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Using a machine learning approach to predict mortality in critically ill influenza patients: A cross-sectional retrospective multicentre study in Taiwan

  • Chien An Hu
  • , Chia Ming Chen
  • , Yen Chun Fang
  • , Shinn Jye Liang
  • , Hao Chien Wang
  • , Wen Feng Fang
  • , Chau Chyun Sheu
  • , Wann Cherng Perng
  • , Kuang Yao Yang
  • , Kuo Chin Kao
  • , Chieh Liang Wu
  • , Chwei Shyong Tsai
  • , Ming Yen Lin
  • , Wen Cheng Chao*
  • *Corresponding author for this work
  • Feng Chia University
  • National Chung Hsing University
  • China Medical University Taichung
  • National Taiwan University
  • Chang Gung Memorial Hospital
  • Chang Gung University of Science and Technology
  • Kaohsiung Medical University
  • Triservice General Hospital Taiwan
  • Veterans General Hospital-Taipei
  • National Yang Ming Chiao Tung University
  • Veterans General Hospital-Taichung Taiwan

Research output: Contribution to journalJournal Article peer-review

93 Scopus citations

Abstract

Current mortality prediction models used in the intensive care unit (ICU) have a limited role for specific diseases such as influenza, and we aimed to establish an explainable machine learning (ML) model for predicting mortality in critically ill influenza patients using a real-world severe influenza data set. Study design A cross-sectional retrospective multicentre study in Taiwan Setting Eight medical centres in Taiwan. Participants A total of 336 patients requiring ICU-admission for virology-proven influenza at eight hospitals during an influenza epidemic between October 2015 and March 2016. Primary and secondary outcome measures We employed extreme gradient boosting (XGBoost) to establish the prediction model, compared the performance with logistic regression (LR) and random forest (RF), demonstrated the feature importance categorised by clinical domains, and used SHapley Additive exPlanations (SHAP) for visualised interpretation. Results The data set contained 76 features of the 336 patients with severe influenza. The severity was apparently high, as shown by the high Acute Physiology and Chronic Health Evaluation II score (22, 17 to 29) and pneumonia severity index score (118, 88 to 151). XGBoost model (area under the curve (AUC): 0.842; 95% CI 0.749 to 0.928) outperformed RF (AUC: 0.809; 95% CI 0.629 to 0.891) and LR (AUC: 0.701; 95% CI 0.573 to 0.825) for predicting 30-day mortality. To give clinicians an intuitive understanding of feature exploitation, we stratified features by the clinical domain. The cumulative feature importance in the fluid balance domain, ventilation domain, laboratory data domain, demographic and symptom domain, management domain and severity score domain was 0.253, 0.113, 0.177, 0.140, 0.152 and 0.165, respectively. We further used SHAP plots to illustrate associations between features and 30-day mortality in critically ill influenza patients. Conclusions We used a real-world data set and applied an ML approach, mainly XGBoost, to establish a practical and explainable mortality prediction model in critically ill influenza patients.

Original languageEnglish
Article numbere033898
JournalBMJ Open
Volume10
Issue number2
DOIs
StatePublished - 25 02 2020

Bibliographical note

Publisher Copyright:
© Author(s) (or their employer(s)) 2020. Re-use permitted under CC BY-NC. No commercial re-use. See rights and permissions. Published by BMJ.

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

Keywords

  • adult intensive & critical care
  • adult intensive & critical care
  • infectious diseases & infestations
  • information technology
  • thoracic medicine

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